WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.2d.2 Sequence Name  F45H7.2d.2
Length (nt)  4262   Chromosome Location  III: 3345918-3363001
Chromosome . Primary Identifier  III Chromosome Location . Start  3345918
Chromosome Location . End  3363001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.2d F45H7.2d 4026   III: 3346506-3346517

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.2 3345918 3363001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82780   178   III: 3345918-3346095 Caenorhabditis elegans
Exon82789   70   III: 3346448-3346517 Caenorhabditis elegans
Exon82793   177   III: 3346568-3346744 Caenorhabditis elegans
Exon82800   81   III: 3347016-3347096 Caenorhabditis elegans
Exon82805   158   III: 3347143-3347300 Caenorhabditis elegans
Exon82810   125   III: 3347425-3347549 Caenorhabditis elegans
Exon82815   200   III: 3347864-3348063 Caenorhabditis elegans
Exon82820   58   III: 3348111-3348168 Caenorhabditis elegans
Exon82825   72   III: 3350502-3350573 Caenorhabditis elegans
Exon82831   137   III: 3355012-3355148 Caenorhabditis elegans
Exon82836   45   III: 3355650-3355694 Caenorhabditis elegans
Exon82841   161   III: 3356247-3356407 Caenorhabditis elegans
Exon82846   81   III: 3356668-3356748 Caenorhabditis elegans
Exon82851   132   III: 3356893-3357024 Caenorhabditis elegans
Exon82856   125   III: 3357402-3357526 Caenorhabditis elegans
Exon82860   343   III: 3357924-3358266 Caenorhabditis elegans
Exon82864   185   III: 3358585-3358769 Caenorhabditis elegans
Exon82869   907   III: 3359169-3360075 Caenorhabditis elegans
Exon82874   112   III: 3360640-3360751 Caenorhabditis elegans
Exon82879   227   III: 3360798-3361024 Caenorhabditis elegans
Exon82884   387   III: 3361130-3361516 Caenorhabditis elegans
Exon82891   183   III: 3361589-3361771 Caenorhabditis elegans
Exon82895   118   III: 3362884-3363001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.2 3345918 3363001 1

1 Sequence

Length
4262

1 Sequence Ontology Term

Identifier Name Description
transcript