WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.2d.3 Sequence Name  F45H7.2d.3
Length (nt)  4500   Chromosome Location  III: 3346446-3363415
Chromosome . Primary Identifier  III Chromosome Location . Start  3346446
Chromosome Location . End  3363415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2d.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.2d F45H7.2d 4026   III: 3346506-3346517

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.3 3346446 3363415 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82785   72   III: 3346446-3346517 Caenorhabditis elegans
Exon82794   177   III: 3346568-3346744 Caenorhabditis elegans
Exon82801   81   III: 3347016-3347096 Caenorhabditis elegans
Exon82806   158   III: 3347143-3347300 Caenorhabditis elegans
Exon82811   125   III: 3347425-3347549 Caenorhabditis elegans
Exon82816   200   III: 3347864-3348063 Caenorhabditis elegans
Exon82821   58   III: 3348111-3348168 Caenorhabditis elegans
Exon82826   72   III: 3350502-3350573 Caenorhabditis elegans
Exon82832   137   III: 3355012-3355148 Caenorhabditis elegans
Exon82837   45   III: 3355650-3355694 Caenorhabditis elegans
Exon82842   161   III: 3356247-3356407 Caenorhabditis elegans
Exon82847   81   III: 3356668-3356748 Caenorhabditis elegans
Exon82852   132   III: 3356893-3357024 Caenorhabditis elegans
Exon82857   125   III: 3357402-3357526 Caenorhabditis elegans
Exon82861   343   III: 3357924-3358266 Caenorhabditis elegans
Exon82865   185   III: 3358585-3358769 Caenorhabditis elegans
Exon82870   907   III: 3359169-3360075 Caenorhabditis elegans
Exon82875   112   III: 3360640-3360751 Caenorhabditis elegans
Exon82880   227   III: 3360798-3361024 Caenorhabditis elegans
Exon82885   387   III: 3361130-3361516 Caenorhabditis elegans
Exon82892   183   III: 3361589-3361771 Caenorhabditis elegans
Exon82897   532   III: 3362884-3363415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.3 3346446 3363415 1

1 Sequence

Length
4500

1 Sequence Ontology Term

Identifier Name Description
transcript