WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A2.6d.1 Sequence Name  F59A2.6d.1
Length (nt)  5437   Chromosome Location  III: 3405568-3425453
Chromosome . Primary Identifier  III Chromosome Location . Start  3405568
Chromosome Location . End  3425453 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A2.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010306 golg-4 F59A2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A2.6d F59A2.6d 4719   III: 3405576-3405689

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A2.6d.1 3405568 3425453 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83054   122   III: 3405568-3405689 Caenorhabditis elegans
Exon83061   102   III: 3405734-3405835 Caenorhabditis elegans
Exon83065   252   III: 3406775-3407026 Caenorhabditis elegans
Exon83069   498   III: 3408018-3408515 Caenorhabditis elegans
Exon83073   345   III: 3409517-3409861 Caenorhabditis elegans
Exon83077   128   III: 3410962-3411089 Caenorhabditis elegans
Exon83084   91   III: 3416801-3416891 Caenorhabditis elegans
Exon83088   192   III: 3417330-3417521 Caenorhabditis elegans
Exon83092   1155   III: 3417856-3419010 Caenorhabditis elegans
Exon83096   225   III: 3419379-3419603 Caenorhabditis elegans
Exon83100   204   III: 3419729-3419932 Caenorhabditis elegans
Exon83104   225   III: 3420220-3420444 Caenorhabditis elegans
Exon83110   170   III: 3421896-3422065 Caenorhabditis elegans
Exon83114   640   III: 3422851-3423490 Caenorhabditis elegans
Exon83118   240   III: 3424030-3424269 Caenorhabditis elegans
Exon83121   848   III: 3424606-3425453 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A2.6d.1 3405568 3425453 1

1 Sequence

Length
5437

1 Sequence Ontology Term

Identifier Name Description
transcript