WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01F1.1.1 Sequence Name  M01F1.1.1
Length (nt)  1410   Chromosome Location  III: 3490337-3493238
Chromosome . Primary Identifier  III Chromosome Location . Start  3490337
Chromosome Location . End  3493238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01F1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001639 gly-14 M01F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01F1.1 M01F1.1 1314   III: 3490419-3490532

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01F1.1.1 3490337 3493238 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83207   196   III: 3490337-3490532 Caenorhabditis elegans
Exon83208   70   III: 3490618-3490687 Caenorhabditis elegans
Exon83209   110   III: 3490741-3490850 Caenorhabditis elegans
Exon83210   91   III: 3491082-3491172 Caenorhabditis elegans
Exon83211   150   III: 3491360-3491509 Caenorhabditis elegans
Exon83212   80   III: 3491753-3491832 Caenorhabditis elegans
Exon83213   110   III: 3491888-3491997 Caenorhabditis elegans
Exon83214   257   III: 3492119-3492375 Caenorhabditis elegans
Exon83215   56   III: 3492493-3492548 Caenorhabditis elegans
Exon83216   51   III: 3492599-3492649 Caenorhabditis elegans
Exon83217   141   III: 3492953-3493093 Caenorhabditis elegans
Exon83218   98   III: 3493141-3493238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01F1.1.1 3490337 3493238 -1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
transcript