WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14B1.6a.1 Sequence Name  C14B1.6a.1
Length (nt)  2567   Chromosome Location  III: 3713463-3718745
Chromosome . Primary Identifier  III Chromosome Location . Start  3713463
Chromosome Location . End  3718745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14B1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007577 nrde-1 C14B1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14B1.6a C14B1.6a 2382   III: 3713497-3713502

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14B1.6a.1 3713463 3718745 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83625   40   III: 3713463-3713502 Caenorhabditis elegans
Exon83626   172   III: 3713549-3713720 Caenorhabditis elegans
Exon83627   150   III: 3714163-3714312 Caenorhabditis elegans
Exon83628   265   III: 3714363-3714627 Caenorhabditis elegans
Exon83629   115   III: 3714682-3714796 Caenorhabditis elegans
Exon83631   535   III: 3715322-3715856 Caenorhabditis elegans
Exon83633   234   III: 3715953-3716186 Caenorhabditis elegans
Exon83635   149   III: 3716800-3716948 Caenorhabditis elegans
Exon83637   128   III: 3717117-3717244 Caenorhabditis elegans
Exon83639   117   III: 3717774-3717890 Caenorhabditis elegans
Exon83641   114   III: 3717936-3718049 Caenorhabditis elegans
Exon83643   79   III: 3718102-3718180 Caenorhabditis elegans
Exon83645   185   III: 3718228-3718412 Caenorhabditis elegans
Exon83647   284   III: 3718462-3718745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14B1.6a.1 3713463 3718745 1

1 Sequence

Length
2567

1 Sequence Ontology Term

Identifier Name Description
transcript