WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C14B1.6a Sequence Name  C14B1.6a
Length (nt)  2382   Chromosome Location  III: 3713497-3713502
Chromosome . Primary Identifier  III Chromosome Location . Start  3713497
Chromosome Location . End  3713502
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14B1.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31415 NRDE-1, isoform a 93.4 793 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00040494
WBRNAi00010725
WBRNAi00006299

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C14B1.6a 3713497 3713502 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007577 nrde-1 C14B1.6 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C14B1.6a 3713497 3713502 1
CDS:C14B1.6a 3713549 3713720 1
CDS:C14B1.6a 3714163 3714312 1
CDS:C14B1.6a 3714363 3714627 1
CDS:C14B1.6a 3714682 3714796 1
CDS:C14B1.6a 3715322 3715856 1
CDS:C14B1.6a 3715953 3716186 1
CDS:C14B1.6a 3716800 3716948 1
CDS:C14B1.6a 3717117 3717244 1
CDS:C14B1.6a 3717774 3717890 1
CDS:C14B1.6a 3717936 3718049 1
CDS:C14B1.6a 3718102 3718180 1
CDS:C14B1.6a 3718228 3718412 1
CDS:C14B1.6a 3718462 3718594 1

1 Sequence

Length
2382

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C14B1.6a.1 C14B1.6a.1 2567   III: 3713463-3718745