WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F34D10.6a.1 Sequence Name  F34D10.6a.1
Length (nt)  3847   Chromosome Location  III: 3747521-3759412
Chromosome . Primary Identifier  III Chromosome Location . Start  3747521
Chromosome Location . End  3759412 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F34D10.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009375 arcp-1 F34D10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F34D10.6a F34D10.6a 3708   III: 3747598-3747693

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F34D10.6a.1 3747521 3759412 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83715   173   III: 3747521-3747693 Caenorhabditis elegans
Exon83717   420   III: 3748281-3748700 Caenorhabditis elegans
Exon83719   201   III: 3748756-3748956 Caenorhabditis elegans
Exon83721   270   III: 3749296-3749565 Caenorhabditis elegans
Exon83723   102   III: 3749645-3749746 Caenorhabditis elegans
Exon83725   201   III: 3749792-3749992 Caenorhabditis elegans
Exon83727   381   III: 3750361-3750741 Caenorhabditis elegans
Exon83729   98   III: 3751150-3751247 Caenorhabditis elegans
Exon83731   261   III: 3751650-3751910 Caenorhabditis elegans
Exon83734   214   III: 3754123-3754336 Caenorhabditis elegans
Exon83735   98   III: 3754457-3754554 Caenorhabditis elegans
Exon83736   183   III: 3754608-3754790 Caenorhabditis elegans
Exon83737   113   III: 3755213-3755325 Caenorhabditis elegans
Exon83738   95   III: 3755421-3755515 Caenorhabditis elegans
Exon83739   117   III: 3756220-3756336 Caenorhabditis elegans
Exon83740   70   III: 3756465-3756534 Caenorhabditis elegans
Exon83741   286   III: 3757043-3757328 Caenorhabditis elegans
Exon83742   187   III: 3757785-3757971 Caenorhabditis elegans
Exon83743   117   III: 3758022-3758138 Caenorhabditis elegans
Exon83744   111   III: 3758190-3758300 Caenorhabditis elegans
Exon83745   149   III: 3759264-3759412 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F34D10.6a.1 3747521 3759412 -1

1 Sequence

Length
3847

1 Sequence Ontology Term

Identifier Name Description
transcript