WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1058.2 Sequence Name  ZK1058.2
Length (nt)  2430   Chromosome Location  III: 3909329-3909400
Chromosome . Primary Identifier  III Chromosome Location . Start  3909329
Chromosome Location . End  3909400
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1058.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01102 PAT-3 90.1 809 Caenorhabditis elegans
 

Other

62 RNAi

WormBase ID
WBRNAi00009448
WBRNAi00063787
WBRNAi00024328
WBRNAi00066954
WBRNAi00067007
WBRNAi00067118
WBRNAi00067120
WBRNAi00067145
WBRNAi00067217
WBRNAi00067219
WBRNAi00067392
WBRNAi00067498
WBRNAi00067613
WBRNAi00067844
WBRNAi00067952
WBRNAi00068095
WBRNAi00059083
WBRNAi00109190
WBRNAi00097795
WBRNAi00077797
WBRNAi00091713
WBRNAi00092227
WBRNAi00085487
WBRNAi00078235
WBRNAi00065778
WBRNAi00078234
WBRNAi00109288
WBRNAi00078237
WBRNAi00078236
WBRNAi00091728

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1058.2 3909329 3909400 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003930 pat-3 ZK1058.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1058.2 3909329 3909400 -1
CDS:ZK1058.2 3909454 3909740 -1
CDS:ZK1058.2 3910174 3910661 -1
CDS:ZK1058.2 3911221 3911559 -1
CDS:ZK1058.2 3912116 3912552 -1
CDS:ZK1058.2 3912651 3913054 -1
CDS:ZK1058.2 3913672 3913876 -1
CDS:ZK1058.2 3913932 3914129 -1

1 Sequence

Length
2430

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1058.2.1 ZK1058.2.1 2848   III: 3908931-3914149