WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F43C1.1 Sequence Name  F43C1.1
Length (nt)  3381   Chromosome Location  III: 4209492-4209700
Chromosome . Primary Identifier  III Chromosome Location . Start  4209492
Chromosome Location . End  4209700
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C1.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51952 PHLP-2 128.1 1126 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047157
WBRNAi00014866
WBRNAi00005057
WBRNAi00032171

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F43C1.1 4209492 4209700 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009647 phlp-2 F43C1.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F43C1.1 4209492 4209700 1
CDS:F43C1.1 4210501 4210808 1
CDS:F43C1.1 4210926 4210991 1
CDS:F43C1.1 4211045 4211277 1
CDS:F43C1.1 4211637 4211930 1
CDS:F43C1.1 4211983 4212207 1
CDS:F43C1.1 4212631 4212712 1
CDS:F43C1.1 4212759 4212915 1
CDS:F43C1.1 4212969 4213124 1
CDS:F43C1.1 4213170 4213248 1
CDS:F43C1.1 4213798 4214076 1
CDS:F43C1.1 4214145 4214374 1
CDS:F43C1.1 4214595 4214709 1
CDS:F43C1.1 4214760 4214835 1
CDS:F43C1.1 4215042 4215138 1
CDS:F43C1.1 4215456 4215753 1
CDS:F43C1.1 4215898 4216046 1
CDS:F43C1.1 4216379 4216706 1

1 Sequence

Length
3381

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F43C1.1.1 F43C1.1.1 3428   III: 4209488-4216749