WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H38K22.1.1 Sequence Name  H38K22.1.1
Length (nt)  4928   Chromosome Location  III: 4303096-4313128
Chromosome . Primary Identifier  III Chromosome Location . Start  4303096
Chromosome Location . End  4313128 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H38K22.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001352 evl-14 H38K22.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H38K22.1 H38K22.1 4713   III: 4303307-4303687

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H38K22.1.1 4303096 4313128 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85366   592   III: 4303096-4303687 Caenorhabditis elegans
Exon85367   345   III: 4304293-4304637 Caenorhabditis elegans
Exon85368   426   III: 4305139-4305564 Caenorhabditis elegans
Exon85369   151   III: 4305801-4305951 Caenorhabditis elegans
Exon85370   336   III: 4306001-4306336 Caenorhabditis elegans
Exon85371   186   III: 4307091-4307276 Caenorhabditis elegans
Exon85372   155   III: 4307333-4307487 Caenorhabditis elegans
Exon85373   240   III: 4307617-4307856 Caenorhabditis elegans
Exon85374   116   III: 4307906-4308021 Caenorhabditis elegans
Exon85375   310   III: 4308542-4308851 Caenorhabditis elegans
Exon85376   114   III: 4309265-4309378 Caenorhabditis elegans
Exon85377   277   III: 4309425-4309701 Caenorhabditis elegans
Exon85378   344   III: 4310335-4310678 Caenorhabditis elegans
Exon85379   146   III: 4310732-4310877 Caenorhabditis elegans
Exon85380   98   III: 4311051-4311148 Caenorhabditis elegans
Exon85381   119   III: 4311206-4311324 Caenorhabditis elegans
Exon85382   252   III: 4311379-4311630 Caenorhabditis elegans
Exon85383   327   III: 4312159-4312485 Caenorhabditis elegans
Exon85384   93   III: 4312533-4312625 Caenorhabditis elegans
Exon85385   213   III: 4312675-4312887 Caenorhabditis elegans
Exon85386   88   III: 4313041-4313128 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H38K22.1.1 4303096 4313128 -1

1 Sequence

Length
4928

1 Sequence Ontology Term

Identifier Name Description
transcript