WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0285.1b.1 Sequence Name  B0285.1b.1
Length (nt)  4120   Chromosome Location  III: 4332992-4341984
Chromosome . Primary Identifier  III Chromosome Location . Start  4332992
Chromosome Location . End  4341984 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007135 cdk-12 B0285.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0285.1b B0285.1b 2205   III: 4333396-4333589

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1b.1 4332992 4341984 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85482   71   III: 4332992-4333062 Caenorhabditis elegans
Exon85486   90   III: 4333135-4333224 Caenorhabditis elegans
Exon85492   196   III: 4333394-4333589 Caenorhabditis elegans
Exon85496   198   III: 4334126-4334323 Caenorhabditis elegans
Exon85502   127   III: 4336227-4336353 Caenorhabditis elegans
Exon85508   114   III: 4336788-4336901 Caenorhabditis elegans
Exon85514   221   III: 4336959-4337179 Caenorhabditis elegans
Exon85520   146   III: 4337533-4337678 Caenorhabditis elegans
Exon85526   290   III: 4337731-4338020 Caenorhabditis elegans
Exon85532   74   III: 4338079-4338152 Caenorhabditis elegans
Exon85538   156   III: 4338414-4338569 Caenorhabditis elegans
Exon85544   195   III: 4338820-4339014 Caenorhabditis elegans
Exon85550   151   III: 4339063-4339213 Caenorhabditis elegans
Exon85556   112   III: 4339508-4339619 Caenorhabditis elegans
Exon85561   1979   III: 4340006-4341984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0285.1b.1 4332992 4341984 1

1 Sequence

Length
4120

1 Sequence Ontology Term

Identifier Name Description
transcript