WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0285.1b Sequence Name  B0285.1b
Length (nt)  2205   Chromosome Location  III: 4333396-4333589
Chromosome . Primary Identifier  III Chromosome Location . Start  4333396
Chromosome Location . End  4333589
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0285.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44061 CDK-12, isoform b 82.9 734 Caenorhabditis elegans
 

Other

49 RNAi

WormBase ID
WBRNAi00008289
WBRNAi00067234
WBRNAi00067539
WBRNAi00067676
WBRNAi00067927
WBRNAi00068074
WBRNAi00068084
WBRNAi00064609
WBRNAi00064640
WBRNAi00038869
WBRNAi00038870
WBRNAi00024374
WBRNAi00008288
WBRNAi00075207
WBRNAi00075206
WBRNAi00094179
WBRNAi00068579
WBRNAi00068578
WBRNAi00068581
WBRNAi00068580
WBRNAi00068583
WBRNAi00068582
WBRNAi00068584
WBRNAi00064474
WBRNAi00064510
WBRNAi00064809
WBRNAi00068814
WBRNAi00068997
WBRNAi00068996
WBRNAi00068999

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0285.1b 4333396 4333589 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007135 cdk-12 B0285.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0285.1b 4333396 4333589 1
CDS:B0285.1b 4334126 4334323 1
CDS:B0285.1b 4336227 4336353 1
CDS:B0285.1b 4336788 4336901 1
CDS:B0285.1b 4336959 4337179 1
CDS:B0285.1b 4337533 4337678 1
CDS:B0285.1b 4337731 4338020 1
CDS:B0285.1b 4338079 4338152 1
CDS:B0285.1b 4338414 4338569 1
CDS:B0285.1b 4338820 4339014 1
CDS:B0285.1b 4339063 4339213 1
CDS:B0285.1b 4339508 4339619 1
CDS:B0285.1b 4340006 4340232 1

1 Sequence

Length
2205

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0285.1b.1 B0285.1b.1 4120   III: 4332992-4341984
Transcript:B0285.1b.2 B0285.1b.2 2473   III: 4333392-4340496