WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07E5.10 Sequence Name  R07E5.10
Length (nt)  1161   Chromosome Location  III: 4415598-4415972
Chromosome . Primary Identifier  III Chromosome Location . Start  4415598
Chromosome Location . End  4415972
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E5.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18125 PDCD-2 43.3 386 Caenorhabditis elegans
 

Other

33 RNAi

WormBase ID
WBRNAi00094375
WBRNAi00067067
WBRNAi00067713
WBRNAi00067757
WBRNAi00068078
WBRNAi00068088
WBRNAi00051479
WBRNAi00026053
WBRNAi00064672
WBRNAi00094202
WBRNAi00094291
WBRNAi00088186
WBRNAi00088309
WBRNAi00071904
WBRNAi00071267
WBRNAi00068665
WBRNAi00068666
WBRNAi00068667
WBRNAi00068668
WBRNAi00111675
WBRNAi00000866
WBRNAi00002434
WBRNAi00009043
WBRNAi00069041
WBRNAi00069042
WBRNAi00094491
WBRNAi00088053
WBRNAi00088094
WBRNAi00088145
WBRNAi00088227

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07E5.10 4415598 4415972 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011116 pdcd-2 R07E5.10 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07E5.10 4415598 4415972 -1
CDS:R07E5.10 4416023 4416317 -1
CDS:R07E5.10 4416710 4417029 -1
CDS:R07E5.10 4417288 4417439 -1
CDS:R07E5.10 4417643 4417661 -1

1 Sequence

Length
1161

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07E5.10.2 R07E5.10.2 1561   III: 4415520-4418057
Transcript:R07E5.10.1 R07E5.10.1 1389   III: 4415521-4417812