WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07G2.2c Sequence Name  C07G2.2c
Length (nt)  1530   Chromosome Location  III: 4492306-4492416
Chromosome . Primary Identifier  III Chromosome Location . Start  4492306
Chromosome Location . End  4492416
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07G2.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33598 ATF-7, isoform c 54.7 509 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00040020
WBRNAi00040021
WBRNAi00040022
WBRNAi00028646
WBRNAi00095299
WBRNAi00093236
WBRNAi00006802
WBRNAi00094624
WBRNAi00007139

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07G2.2c 4492306 4492416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000223 atf-7 C07G2.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07G2.2c 4492306 4492416 -1
CDS:C07G2.2c 4492652 4492768 -1
CDS:C07G2.2c 4492810 4493101 -1
CDS:C07G2.2c 4493158 4493561 -1
CDS:C07G2.2c 4493679 4494092 -1
CDS:C07G2.2c 4494187 4494378 -1

1 Sequence

Length
1530

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07G2.2c.1 C07G2.2c.1 2277   III: 4491631-4494450