WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.3a.1 Sequence Name  F35G12.3a.1
Length (nt)  3596   Chromosome Location  III: 4571764-4578437
Chromosome . Primary Identifier  III Chromosome Location . Start  4571764
Chromosome Location . End  4578437 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004762 sel-5 F35G12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.3a F35G12.3a 3234   III: 4572116-4572207

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.3a.1 4571764 4578437 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86197   444   III: 4571764-4572207 Caenorhabditis elegans
Exon86198   499   III: 4572757-4573255 Caenorhabditis elegans
Exon86199   306   III: 4573554-4573859 Caenorhabditis elegans
Exon86200   114   III: 4573909-4574022 Caenorhabditis elegans
Exon86201   159   III: 4574488-4574646 Caenorhabditis elegans
Exon86202   104   III: 4574702-4574805 Caenorhabditis elegans
Exon86204   126   III: 4575309-4575434 Caenorhabditis elegans
Exon86205   221   III: 4575637-4575857 Caenorhabditis elegans
Exon86207   320   III: 4575905-4576224 Caenorhabditis elegans
Exon86209   297   III: 4576657-4576953 Caenorhabditis elegans
Exon86211   113   III: 4577055-4577167 Caenorhabditis elegans
Exon86213   153   III: 4577215-4577367 Caenorhabditis elegans
Exon86215   336   III: 4577433-4577768 Caenorhabditis elegans
Exon86217   106   III: 4577857-4577962 Caenorhabditis elegans
Exon86219   122   III: 4578010-4578131 Caenorhabditis elegans
Exon86221   57   III: 4578215-4578271 Caenorhabditis elegans
Exon86223   119   III: 4578319-4578437 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.3a.1 4571764 4578437 -1

1 Sequence

Length
3596

1 Sequence Ontology Term

Identifier Name Description
transcript