WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F35G12.3a Sequence Name  F35G12.3a
Length (nt)  3234   Chromosome Location  III: 4572116-4572207
Chromosome . Primary Identifier  III Chromosome Location . Start  4572116
Chromosome Location . End  4572207
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00971 SEL-5, isoform a 120.0 1077 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00001562
WBRNAi00046395
WBRNAi00046396
WBRNAi00014366
WBRNAi00005043
WBRNAi00007002
WBRNAi00031803
WBRNAi00108277
WBRNAi00066157
WBRNAi00002014
WBRNAi00098492

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F35G12.3a 4572116 4572207 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004762 sel-5 F35G12.3 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F35G12.3a 4572116 4572207 -1
CDS:F35G12.3a 4572757 4573255 -1
CDS:F35G12.3a 4573554 4573859 -1
CDS:F35G12.3a 4573909 4574022 -1
CDS:F35G12.3a 4574488 4574646 -1
CDS:F35G12.3a 4574702 4574805 -1
CDS:F35G12.3a 4575309 4575434 -1
CDS:F35G12.3a 4575637 4575857 -1
CDS:F35G12.3a 4575905 4576224 -1
CDS:F35G12.3a 4576657 4576953 -1
CDS:F35G12.3a 4577055 4577167 -1
CDS:F35G12.3a 4577215 4577367 -1
CDS:F35G12.3a 4577433 4577768 -1
CDS:F35G12.3a 4577857 4577962 -1
CDS:F35G12.3a 4578010 4578131 -1
CDS:F35G12.3a 4578215 4578271 -1
CDS:F35G12.3a 4578319 4578427 -1

1 Sequence

Length
3234

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35G12.3a.1 F35G12.3a.1 3596   III: 4571764-4578437