WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.4a.1 Sequence Name  F35G12.4a.1
Length (nt)  2207   Chromosome Location  III: 4578855-4581693
Chromosome . Primary Identifier  III Chromosome Location . Start  4578855
Chromosome Location . End  4581693 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009441 wdr-48 F35G12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.4a F35G12.4a 2052   III: 4578882-4579067

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.4a.1 4578855 4581693 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86263   213   III: 4578855-4579067 Caenorhabditis elegans
Exon86265   127   III: 4579121-4579247 Caenorhabditis elegans
Exon86268   92   III: 4579299-4579390 Caenorhabditis elegans
Exon86271   195   III: 4579438-4579632 Caenorhabditis elegans
Exon86274   207   III: 4579679-4579885 Caenorhabditis elegans
Exon86277   188   III: 4579933-4580120 Caenorhabditis elegans
Exon86280   173   III: 4580165-4580337 Caenorhabditis elegans
Exon86283   107   III: 4580383-4580489 Caenorhabditis elegans
Exon86286   99   III: 4580540-4580638 Caenorhabditis elegans
Exon86289   94   III: 4580692-4580785 Caenorhabditis elegans
Exon86292   148   III: 4580840-4580987 Caenorhabditis elegans
Exon86295   192   III: 4581039-4581230 Caenorhabditis elegans
Exon86298   83   III: 4581280-4581362 Caenorhabditis elegans
Exon86301   289   III: 4581405-4581693 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.4a.1 4578855 4581693 1

1 Sequence

Length
2207

1 Sequence Ontology Term

Identifier Name Description
transcript