WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G12.8.1 Sequence Name  F35G12.8.1
Length (nt)  4959   Chromosome Location  III: 4587501-4593124
Chromosome . Primary Identifier  III Chromosome Location . Start  4587501
Chromosome Location . End  4593124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004874 smc-4 F35G12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G12.8 F35G12.8 4650   III: 4587506-4587655

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.8.1 4587501 4593124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon86318   155   III: 4587501-4587655 Caenorhabditis elegans
Exon86319   66   III: 4587709-4587774 Caenorhabditis elegans
Exon86320   315   III: 4587819-4588133 Caenorhabditis elegans
Exon86321   174   III: 4588182-4588355 Caenorhabditis elegans
Exon86322   293   III: 4588397-4588689 Caenorhabditis elegans
Exon86323   745   III: 4588736-4589480 Caenorhabditis elegans
Exon86324   258   III: 4589529-4589786 Caenorhabditis elegans
Exon86325   435   III: 4589832-4590266 Caenorhabditis elegans
Exon86326   208   III: 4590316-4590523 Caenorhabditis elegans
Exon86327   506   III: 4590573-4591078 Caenorhabditis elegans
Exon86328   519   III: 4591127-4591645 Caenorhabditis elegans
Exon86329   224   III: 4591699-4591922 Caenorhabditis elegans
Exon86330   539   III: 4591967-4592505 Caenorhabditis elegans
Exon86331   92   III: 4592555-4592646 Caenorhabditis elegans
Exon86332   430   III: 4592695-4593124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G12.8.1 4587501 4593124 1

1 Sequence

Length
4959

1 Sequence Ontology Term

Identifier Name Description
transcript