WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F35G12.8 Sequence Name  F35G12.8
Length (nt)  4650   Chromosome Location  III: 4587506-4587655
Chromosome . Primary Identifier  III Chromosome Location . Start  4587506
Chromosome Location . End  4587655
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G12.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03287 SMC-4 176.6 1549 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00067248
WBRNAi00008750
WBRNAi00082675
WBRNAi00046405
WBRNAi00046406
WBRNAi00064311
WBRNAi00007841
WBRNAi00001932
WBRNAi00002424
WBRNAi00002714
WBRNAi00022927
WBRNAi00025392
WBRNAi00098003
WBRNAi00098020
WBRNAi00098023
WBRNAi00082382
WBRNAi00111956
WBRNAi00065722
WBRNAi00092866
WBRNAi00080296
WBRNAi00116023
WBRNAi00116020
WBRNAi00110841

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F35G12.8 4587506 4587655 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004874 smc-4 F35G12.8 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F35G12.8 4587506 4587655 1
CDS:F35G12.8 4587709 4587774 1
CDS:F35G12.8 4587819 4588133 1
CDS:F35G12.8 4588182 4588355 1
CDS:F35G12.8 4588397 4588689 1
CDS:F35G12.8 4588736 4589480 1
CDS:F35G12.8 4589529 4589786 1
CDS:F35G12.8 4589832 4590266 1
CDS:F35G12.8 4590316 4590523 1
CDS:F35G12.8 4590573 4591078 1
CDS:F35G12.8 4591127 4591645 1
CDS:F35G12.8 4591699 4591922 1
CDS:F35G12.8 4591967 4592505 1
CDS:F35G12.8 4592555 4592646 1
CDS:F35G12.8 4592695 4592820 1

1 Sequence

Length
4650

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F35G12.8.1 F35G12.8.1 4959   III: 4587501-4593124