WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04A8.16 Sequence Name  T04A8.16
Length (nt)  2418   Chromosome Location  III: 4700449-4700523
Chromosome . Primary Identifier  III Chromosome Location . Start  4700449
Chromosome Location . End  4700523
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A8.16

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01070 CLP-2 92.4 805 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00052336
WBRNAi00018111
WBRNAi00076640
WBRNAi00005295
WBRNAi00023297
WBRNAi00023568
WBRNAi00023807
WBRNAi00024095

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04A8.16 4700449 4700523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000543 clp-2 T04A8.16 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04A8.16 4700449 4700523 -1
CDS:T04A8.16 4700613 4700844 -1
CDS:T04A8.16 4701016 4701253 -1
CDS:T04A8.16 4701315 4701768 -1
CDS:T04A8.16 4702266 4702490 -1
CDS:T04A8.16 4702540 4702780 -1
CDS:T04A8.16 4702830 4702990 -1
CDS:T04A8.16 4703038 4703318 -1
CDS:T04A8.16 4703366 4703648 -1
CDS:T04A8.16 4703695 4703859 -1
CDS:T04A8.16 4703954 4704016 -1

1 Sequence

Length
2418

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04A8.16.1 T04A8.16.1 2551   III: 4700325-4704025