WormMine: MRNA Transcript:C27F2.2a.1

• WormMine ID: Transcript:C27F2.2a.1
• Sequence Name: C27F2.2a.1
• Length (nt): 5611
• Chromosome Location: III: 4965571-4979738
• Chromosome . Primary Identifier: III
• Chromosome Location . Start: 4965571
• Chromosome Location . End: 4979738
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: C27F2.2a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00003558	nca-2	C27F2.2	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:C27F2.2a	C27F2.2a	5358	III: 4965661-4965688

1 Chromosome

• WormBase ID: III
• Organism: Caenorhabditis elegans
• Length (nt): 13783801

1 Chromosome Location

• Feature . Primary Identifier: Transcript:C27F2.2a.1
• Start: 4965571
• End: 4979738
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

23 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon87456			118	III: 4965571-4965688	Caenorhabditis elegans
Exon87459			171	III: 4970211-4970381	Caenorhabditis elegans
Exon87462			329	III: 4971299-4971627	Caenorhabditis elegans
Exon87464			113	III: 4971704-4971816	Caenorhabditis elegans
Exon87466			421	III: 4971895-4972315	Caenorhabditis elegans
Exon87468			195	III: 4972553-4972747	Caenorhabditis elegans
Exon87470			244	III: 4972801-4973044	Caenorhabditis elegans
Exon87472			251	III: 4973507-4973757	Caenorhabditis elegans
Exon87474			138	III: 4973866-4974003	Caenorhabditis elegans
Exon87476			286	III: 4974052-4974337	Caenorhabditis elegans
Exon87478			391	III: 4974757-4975147	Caenorhabditis elegans
Exon87480			177	III: 4975199-4975375	Caenorhabditis elegans
Exon87482			136	III: 4975427-4975562	Caenorhabditis elegans
Exon87484			132	III: 4975711-4975842	Caenorhabditis elegans
Exon87486			168	III: 4975893-4976060	Caenorhabditis elegans
Exon87488			333	III: 4976361-4976693	Caenorhabditis elegans
Exon87490			514	III: 4976815-4977328	Caenorhabditis elegans
Exon87492			253	III: 4977566-4977818	Caenorhabditis elegans
Exon87494			230	III: 4977874-4978103	Caenorhabditis elegans
Exon87496			274	III: 4978366-4978639	Caenorhabditis elegans
Exon87498			163	III: 4978701-4978863	Caenorhabditis elegans
Exon87500			168	III: 4978913-4979080	Caenorhabditis elegans
Exon87503			406	III: 4979333-4979738	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:C27F2.2a.1
• Start: 4965571
• End: 4979738
• Strand: 1

1 Sequence

• Length: 5611

1 Sequence Ontology Term

• Name: transcript