WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C27F2.2a Sequence Name  C27F2.2a
Length (nt)  5358   Chromosome Location  III: 4965661-4965688
Chromosome . Primary Identifier  III Chromosome Location . Start  4965661
Chromosome Location . End  4965688
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27F2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38941 NCA-2, isoform a 205.9 1785 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00041359
WBRNAi00041360
WBRNAi00044887
WBRNAi00011267
WBRNAi00011268
WBRNAi00013467
WBRNAi00005088
WBRNAi00005146
WBRNAi00005231
WBRNAi00082556
WBRNAi00082652

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C27F2.2a 4965661 4965688 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003558 nca-2 C27F2.2 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:C27F2.2a 4965661 4965688 1
CDS:C27F2.2a 4970211 4970381 1
CDS:C27F2.2a 4971299 4971627 1
CDS:C27F2.2a 4971704 4971816 1
CDS:C27F2.2a 4971895 4972315 1
CDS:C27F2.2a 4972553 4972747 1
CDS:C27F2.2a 4972801 4973044 1
CDS:C27F2.2a 4973507 4973757 1
CDS:C27F2.2a 4973866 4974003 1
CDS:C27F2.2a 4974052 4974337 1
CDS:C27F2.2a 4974757 4975147 1
CDS:C27F2.2a 4975199 4975375 1
CDS:C27F2.2a 4975427 4975562 1
CDS:C27F2.2a 4975711 4975842 1
CDS:C27F2.2a 4975893 4976060 1
CDS:C27F2.2a 4976361 4976693 1
CDS:C27F2.2a 4976815 4977328 1
CDS:C27F2.2a 4977566 4977818 1
CDS:C27F2.2a 4977874 4978103 1
CDS:C27F2.2a 4978366 4978639 1
CDS:C27F2.2a 4978701 4978863 1
CDS:C27F2.2a 4978913 4979080 1
CDS:C27F2.2a 4979333 4979575 1

1 Sequence

Length
5358

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C27F2.2a.1 C27F2.2a.1 5611   III: 4965571-4979738