WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R144.7a.1 Sequence Name  R144.7a.1
Length (nt)  3637   Chromosome Location  III: 5008925-5016524
Chromosome . Primary Identifier  III Chromosome Location . Start  5008925
Chromosome Location . End  5016524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R144.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020097 larp-1 R144.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R144.7a R144.7a 2457   III: 5010105-5010131

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R144.7a.1 5008925 5016524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon87594   1207   III: 5008925-5010131 Caenorhabditis elegans
Exon87596   82   III: 5010181-5010262 Caenorhabditis elegans
Exon87598   159   III: 5010308-5010466 Caenorhabditis elegans
Exon87600   446   III: 5010544-5010989 Caenorhabditis elegans
Exon87603   199   III: 5011473-5011671 Caenorhabditis elegans
Exon87605   603   III: 5011724-5012326 Caenorhabditis elegans
Exon87607   572   III: 5012456-5013027 Caenorhabditis elegans
Exon87609   193   III: 5013081-5013273 Caenorhabditis elegans
Exon87612   55   III: 5016297-5016351 Caenorhabditis elegans
Exon87614   121   III: 5016404-5016524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R144.7a.1 5008925 5016524 -1

1 Sequence

Length
3637

1 Sequence Ontology Term

Identifier Name Description
transcript