WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48E8.5 Sequence Name  F48E8.5
Length (nt)  1773   Chromosome Location  III: 5450741-5451249
Chromosome . Primary Identifier  III Chromosome Location . Start  5450741
Chromosome Location . End  5451249
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SummaryProteinsOther
 
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30997 PAA-1 66.1 590 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00068232
WBRNAi00078387
WBRNAi00047754
WBRNAi00111732
WBRNAi00071699
WBRNAi00025552
WBRNAi00002814
WBRNAi00069368
WBRNAi00069369
WBRNAi00091027
WBRNAi00032489
WBRNAi00071279
WBRNAi00071280
WBRNAi00002451
WBRNAi00080613
WBRNAi00088793
WBRNAi00115358
WBRNAi00085450
WBRNAi00115360
WBRNAi00115362
WBRNAi00115364
WBRNAi00088801
WBRNAi00115366
WBRNAi00008818
WBRNAi00047753

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F48E8.5 5450741 5451249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003901 paa-1 F48E8.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F48E8.5 5450741 5451249 1
CDS:F48E8.5 5451301 5452160 1
CDS:F48E8.5 5452208 5452425 1
CDS:F48E8.5 5452479 5452558 1
CDS:F48E8.5 5452603 5452694 1
CDS:F48E8.5 5452749 5452762 1

1 Sequence

Length
1773

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48E8.5.1 F48E8.5.1 2159   III: 5450730-5453137