WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1044.8.1 Sequence Name  D1044.8.1
Length (nt)  3155   Chromosome Location  III: 5512912-5517523
Chromosome . Primary Identifier  III Chromosome Location . Start  5512912
Chromosome Location . End  5517523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017033 nekl-4 D1044.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1044.8 D1044.8 2946   III: 5513121-5513203

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1044.8.1 5512912 5517523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon89067   292   III: 5512912-5513203 Caenorhabditis elegans
Exon89068   507   III: 5513249-5513755 Caenorhabditis elegans
Exon89069   405   III: 5513970-5514374 Caenorhabditis elegans
Exon89070   232   III: 5514521-5514752 Caenorhabditis elegans
Exon89071   438   III: 5514894-5515331 Caenorhabditis elegans
Exon89072   595   III: 5515447-5516041 Caenorhabditis elegans
Exon89075   113   III: 5516349-5516461 Caenorhabditis elegans
Exon89076   125   III: 5516508-5516632 Caenorhabditis elegans
Exon89077   260   III: 5516679-5516938 Caenorhabditis elegans
Exon89078   84   III: 5517097-5517180 Caenorhabditis elegans
Exon89079   104   III: 5517420-5517523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1044.8.1 5512912 5517523 -1

1 Sequence

Length
3155

1 Sequence Ontology Term

Identifier Name Description
transcript