WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1044.8 Sequence Name  D1044.8
Length (nt)  2946   Chromosome Location  III: 5513121-5513203
Chromosome . Primary Identifier  III Chromosome Location . Start  5513121
Chromosome Location . End  5513203
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1044.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39141 NEKL-4 111.6 981 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00007279
WBRNAi00043375
WBRNAi00012516
WBRNAi00005238

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1044.8 5513121 5513203 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017033 nekl-4 D1044.8 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1044.8 5513121 5513203 -1
CDS:D1044.8 5513249 5513755 -1
CDS:D1044.8 5513970 5514374 -1
CDS:D1044.8 5514521 5514752 -1
CDS:D1044.8 5514894 5515331 -1
CDS:D1044.8 5515447 5516041 -1
CDS:D1044.8 5516349 5516461 -1
CDS:D1044.8 5516508 5516632 -1
CDS:D1044.8 5516679 5516938 -1
CDS:D1044.8 5517097 5517180 -1
CDS:D1044.8 5517420 5517523 -1

1 Sequence

Length
2946

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1044.8.1 D1044.8.1 3155   III: 5512912-5517523