WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56D2.1c Sequence Name  F56D2.1c
Length (nt)  1422   Chromosome Location  III: 5592158-5592211
Chromosome . Primary Identifier  III Chromosome Location . Start  5592158
Chromosome Location . End  5592211
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D2.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52122 UCR-1, isoform c 51.9 473 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00095646
WBRNAi00067154
WBRNAi00067198
WBRNAi00067634
WBRNAi00067655
WBRNAi00048696
WBRNAi00085866
WBRNAi00105985
WBRNAi00106024
WBRNAi00111116
WBRNAi00078564
WBRNAi00032956
WBRNAi00025706
WBRNAi00097868
WBRNAi00002672
WBRNAi00002749
WBRNAi00008879
WBRNAi00048695
WBRNAi00048697
WBRNAi00089089
WBRNAi00102820
WBRNAi00109843
WBRNAi00106229
WBRNAi00116046
WBRNAi00110861

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56D2.1c 5592158 5592211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018963 ucr-1 F56D2.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56D2.1c 5592158 5592211 1
CDS:F56D2.1c 5592354 5592479 1
CDS:F56D2.1c 5592529 5592745 1
CDS:F56D2.1c 5592795 5592994 1
CDS:F56D2.1c 5593039 5593281 1
CDS:F56D2.1c 5593331 5593388 1
CDS:F56D2.1c 5593440 5593557 1
CDS:F56D2.1c 5593610 5593820 1
CDS:F56D2.1c 5593871 5594000 1
CDS:F56D2.1c 5594067 5594131 1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56D2.1c.1 F56D2.1c.1 1616   III: 5592158-5594325