WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54E7.1a Sequence Name  F54E7.1a
Length (nt)  1095   Chromosome Location  III: 5680498-5680604
Chromosome . Primary Identifier  III Chromosome Location . Start  5680498
Chromosome Location . End  5680604
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54E7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01312 PST-2, isoform a 40.8 364 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00048347
WBRNAi00015639
WBRNAi00006854
WBRNAi00033637
WBRNAi00107003
WBRNAi00106890

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54E7.1a 5680498 5680604 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018827 pst-2 F54E7.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54E7.1a 5680498 5680604 1
CDS:F54E7.1a 5680710 5680782 1
CDS:F54E7.1a 5680836 5680957 1
CDS:F54E7.1a 5681374 5681579 1
CDS:F54E7.1a 5681627 5682213 1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54E7.1a.1 F54E7.1a.1 1272   III: 5680433-5682325