WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0336.6 Sequence Name  B0336.6
Length (nt)  1410   Chromosome Location  III: 5690229-5690389
Chromosome . Primary Identifier  III Chromosome Location . Start  5690229
Chromosome Location . End  5690389
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0336.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29545 ABI-1 51.3 469 Caenorhabditis elegans
 

Other

58 RNAi

WormBase ID
WBRNAi00078852
WBRNAi00094410
WBRNAi00094409
WBRNAi00073498
WBRNAi00061106
WBRNAi00008297
WBRNAi00064789
WBRNAi00024383
WBRNAi00073491
WBRNAi00073493
WBRNAi00073492
WBRNAi00073495
WBRNAi00073494
WBRNAi00073497
WBRNAi00073496
WBRNAi00072329
WBRNAi00068585
WBRNAi00068587
WBRNAi00068586
WBRNAi00068589
WBRNAi00068588
WBRNAi00080789
WBRNAi00069001
WBRNAi00071858
WBRNAi00078855
WBRNAi00005239
WBRNAi00109541
WBRNAi00080790
WBRNAi00080792
WBRNAi00080791

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0336.6 5690229 5690389 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015146 abi-1 B0336.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0336.6 5690229 5690389 -1
CDS:B0336.6 5690874 5691465 -1
CDS:B0336.6 5691957 5692398 -1
CDS:B0336.6 5692445 5692530 -1
CDS:B0336.6 5692578 5692706 -1

1 Sequence

Length
1410

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0336.6.2 B0336.6.2 1568   III: 5690105-5692740
Transcript:B0336.6.1 B0336.6.1 1556   III: 5690107-5692730