WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01F1.12.2 Sequence Name  F01F1.12.2
Length (nt)  1226   Chromosome Location  III: 5874673-5876625
Chromosome . Primary Identifier  III Chromosome Location . Start  5874673
Chromosome Location . End  5876625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017166 aldo-2 F01F1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01F1.12 F01F1.12 1101   III: 5874774-5874998

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.12.2 5874673 5876625 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90297   326   III: 5874673-5874998 Caenorhabditis elegans
Exon90300   752   III: 5875050-5875801 Caenorhabditis elegans
Exon90302   82   III: 5876139-5876220 Caenorhabditis elegans
Exon90303   58   III: 5876280-5876337 Caenorhabditis elegans
Exon90305   8   III: 5876618-5876625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01F1.12.2 5874673 5876625 -1

1 Sequence

Length
1226

1 Sequence Ontology Term

Identifier Name Description
transcript