WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F01F1.12 Sequence Name  F01F1.12
Length (nt)  1101   Chromosome Location  III: 5874774-5874998
Chromosome . Primary Identifier  III Chromosome Location . Start  5874774
Chromosome Location . End  5874998
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01F1.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01225 ALDO-2 38.8 366 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00043744
WBRNAi00008595
WBRNAi00024995
WBRNAi00006856
WBRNAi00043743
WBRNAi00113973

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F01F1.12 5874774 5874998 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017166 aldo-2 F01F1.12 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F01F1.12 5874774 5874998 -1
CDS:F01F1.12 5875050 5875801 -1
CDS:F01F1.12 5876139 5876220 -1
CDS:F01F1.12 5876280 5876321 -1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F01F1.12.2 F01F1.12.2 1226   III: 5874673-5876625
Transcript:F01F1.12.1 F01F1.12.1 1346   III: 5874678-5876470