WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04C9.6a.2 Sequence Name  T04C9.6a.2
Length (nt)  1849   Chromosome Location  III: 5976781-5980329
Chromosome . Primary Identifier  III Chromosome Location . Start  5976781
Chromosome Location . End  5980329 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04C9.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04C9.6a T04C9.6a 1722   III: 5976856-5976948

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04C9.6a.2 5976781 5980329 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon90663   168   III: 5976781-5976948 Caenorhabditis elegans
Exon90669   435   III: 5977005-5977439 Caenorhabditis elegans
Exon90674   339   III: 5977676-5978014 Caenorhabditis elegans
Exon90679   250   III: 5978123-5978372 Caenorhabditis elegans
Exon90684   121   III: 5978869-5978989 Caenorhabditis elegans
Exon90689   98   III: 5979046-5979143 Caenorhabditis elegans
Exon90694   125   III: 5979189-5979313 Caenorhabditis elegans
Exon90699   105   III: 5979369-5979473 Caenorhabditis elegans
Exon90704   156   III: 5979708-5979863 Caenorhabditis elegans
Exon90708   52   III: 5980278-5980329 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04C9.6a.2 5976781 5980329 -1

1 Sequence

Length
1849

1 Sequence Ontology Term

Identifier Name Description
transcript