WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T04C9.6a Sequence Name  T04C9.6a
Length (nt)  1722   Chromosome Location  III: 5976856-5976948
Chromosome . Primary Identifier  III Chromosome Location . Start  5976856
Chromosome Location . End  5976948
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04C9.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29463 FRM-2, isoform a 65.7 573 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00052383
WBRNAi00052384
WBRNAi00114827
WBRNAi00018140
WBRNAi00005371
WBRNAi00006806
WBRNAi00035134
WBRNAi00077328

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T04C9.6a 5976856 5976948 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T04C9.6a 5976856 5976948 -1
CDS:T04C9.6a 5977005 5977439 -1
CDS:T04C9.6a 5977676 5978014 -1
CDS:T04C9.6a 5978123 5978372 -1
CDS:T04C9.6a 5978869 5978989 -1
CDS:T04C9.6a 5979046 5979143 -1
CDS:T04C9.6a 5979189 5979313 -1
CDS:T04C9.6a 5979369 5979473 -1
CDS:T04C9.6a 5979708 5979863 -1

1 Sequence

Length
1722

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T04C9.6a.2 T04C9.6a.2 1849   III: 5976781-5980329
Transcript:T04C9.6a.1 T04C9.6a.1 1886   III: 5976781-5982126
Transcript:T04C9.6a.3 T04C9.6a.3 1955   III: 5976781-5981426
Transcript:T04C9.6a.4 T04C9.6a.4 1799   III: 5976781-5979865