WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42A10.2a Sequence Name  F42A10.2a
Length (nt)  1965   Chromosome Location  III: 6159879-6160100
Chromosome . Primary Identifier  III Chromosome Location . Start  6159879
Chromosome Location . End  6160100
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A10.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01293 NFM-1, isoform a 75.6 654 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00000552
WBRNAi00047055
WBRNAi00114838
WBRNAi00014790
WBRNAi00005113
WBRNAi00109588
WBRNAi00032116
WBRNAi00109199
WBRNAi00080558
WBRNAi00109394
WBRNAi00109297
WBRNAi00109491

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42A10.2a 6159879 6160100 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003593 nfm-1 F42A10.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42A10.2a 6159879 6160100 1
CDS:F42A10.2a 6160231 6160446 1
CDS:F42A10.2a 6160793 6161011 1
CDS:F42A10.2a 6161088 6161222 1
CDS:F42A10.2a 6161270 6161404 1
CDS:F42A10.2a 6161480 6161782 1
CDS:F42A10.2a 6161826 6161975 1
CDS:F42A10.2a 6162077 6162164 1
CDS:F42A10.2a 6162637 6162907 1
CDS:F42A10.2a 6163019 6163193 1
CDS:F42A10.2a 6164293 6164343 1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42A10.2a.1 F42A10.2a.1 2637   III: 6159453-6164589