WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42A10.4b Sequence Name  F42A10.4b
Length (nt)  2283   Chromosome Location  III: 6165289-6165553
Chromosome . Primary Identifier  III Chromosome Location . Start  6165289
Chromosome Location . End  6165553
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A10.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32416 EFK-1, isoform b 87.0 760 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00047057
WBRNAi00014792
WBRNAi00005317
WBRNAi00098182
WBRNAi00027708
WBRNAi00115388
WBRNAi00097655

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42A10.4b 6165289 6165553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001160 efk-1 F42A10.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42A10.4b 6165289 6165553 -1
CDS:F42A10.4b 6166151 6166295 -1
CDS:F42A10.4b 6166519 6167254 -1
CDS:F42A10.4b 6167308 6168384 -1
CDS:F42A10.4b 6168471 6168530 -1

1 Sequence

Length
2283

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42A10.4b.1 F42A10.4b.1 2683   III: 6164906-6168547