WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12A2.15.2 Sequence Name  T12A2.15.2
Length (nt)  2638   Chromosome Location  III: 6224427-6229402
Chromosome . Primary Identifier  III Chromosome Location . Start  6224427
Chromosome Location . End  6229402 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A2.15.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020443 esyt-2 T12A2.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12A2.15 T12A2.15 2427   III: 6224618-6224695

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.15.2 6224427 6229402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91686   269   III: 6224427-6224695 Caenorhabditis elegans
Exon91690   109   III: 6224743-6224851 Caenorhabditis elegans
Exon91693   92   III: 6224975-6225066 Caenorhabditis elegans
Exon91696   136   III: 6225175-6225310 Caenorhabditis elegans
Exon91699   107   III: 6225357-6225463 Caenorhabditis elegans
Exon91702   128   III: 6225717-6225844 Caenorhabditis elegans
Exon91705   76   III: 6226180-6226255 Caenorhabditis elegans
Exon91708   81   III: 6226487-6226567 Caenorhabditis elegans
Exon91711   153   III: 6226842-6226994 Caenorhabditis elegans
Exon91714   159   III: 6227057-6227215 Caenorhabditis elegans
Exon91717   180   III: 6227263-6227442 Caenorhabditis elegans
Exon91720   303   III: 6227487-6227789 Caenorhabditis elegans
Exon91723   90   III: 6227929-6228018 Caenorhabditis elegans
Exon91726   177   III: 6228066-6228242 Caenorhabditis elegans
Exon91729   204   III: 6228284-6228487 Caenorhabditis elegans
Exon91732   196   III: 6228635-6228830 Caenorhabditis elegans
Exon91735   88   III: 6229163-6229250 Caenorhabditis elegans
Exon91737   90   III: 6229313-6229402 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.15.2 6224427 6229402 -1

1 Sequence

Length
2638

1 Sequence Ontology Term

Identifier Name Description
transcript