WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T12A2.15 Sequence Name  T12A2.15
Length (nt)  2427   Chromosome Location  III: 6224618-6224695
Chromosome . Primary Identifier  III Chromosome Location . Start  6224618
Chromosome Location . End  6224695
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A2.15

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54143 ESYT-2 92.1 808 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00000426
WBRNAi00053152
WBRNAi00053153
WBRNAi00018617
WBRNAi00005029
WBRNAi00005053
WBRNAi00035491
WBRNAi00080566
WBRNAi00114666

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T12A2.15 6224618 6224695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020443 esyt-2 T12A2.15 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:T12A2.15 6224618 6224695 -1
CDS:T12A2.15 6224743 6224851 -1
CDS:T12A2.15 6224975 6225066 -1
CDS:T12A2.15 6225175 6225310 -1
CDS:T12A2.15 6225357 6225463 -1
CDS:T12A2.15 6225717 6225844 -1
CDS:T12A2.15 6226180 6226255 -1
CDS:T12A2.15 6226487 6226567 -1
CDS:T12A2.15 6226842 6226994 -1
CDS:T12A2.15 6227057 6227215 -1
CDS:T12A2.15 6227263 6227442 -1
CDS:T12A2.15 6227487 6227789 -1
CDS:T12A2.15 6227929 6228018 -1
CDS:T12A2.15 6228066 6228242 -1
CDS:T12A2.15 6228284 6228487 -1
CDS:T12A2.15 6228635 6228830 -1
CDS:T12A2.15 6229163 6229250 -1
CDS:T12A2.15 6229313 6229382 -1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12A2.15.2 T12A2.15.2 2638   III: 6224427-6229402
Transcript:T12A2.15.3 T12A2.15.3 2739   III: 6224427-6230970
Transcript:T12A2.15.1 T12A2.15.1 2630   III: 6224436-6229403