WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12A2.15.3 Sequence Name  T12A2.15.3
Length (nt)  2739   Chromosome Location  III: 6224427-6230970
Chromosome . Primary Identifier  III Chromosome Location . Start  6224427
Chromosome Location . End  6230970 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A2.15.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020443 esyt-2 T12A2.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12A2.15 T12A2.15 2427   III: 6224618-6224695

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.15.3 6224427 6230970 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91687   269   III: 6224427-6224695 Caenorhabditis elegans
Exon91691   109   III: 6224743-6224851 Caenorhabditis elegans
Exon91694   92   III: 6224975-6225066 Caenorhabditis elegans
Exon91697   136   III: 6225175-6225310 Caenorhabditis elegans
Exon91700   107   III: 6225357-6225463 Caenorhabditis elegans
Exon91703   128   III: 6225717-6225844 Caenorhabditis elegans
Exon91706   76   III: 6226180-6226255 Caenorhabditis elegans
Exon91709   81   III: 6226487-6226567 Caenorhabditis elegans
Exon91712   153   III: 6226842-6226994 Caenorhabditis elegans
Exon91715   159   III: 6227057-6227215 Caenorhabditis elegans
Exon91718   180   III: 6227263-6227442 Caenorhabditis elegans
Exon91721   303   III: 6227487-6227789 Caenorhabditis elegans
Exon91724   90   III: 6227929-6228018 Caenorhabditis elegans
Exon91727   177   III: 6228066-6228242 Caenorhabditis elegans
Exon91730   204   III: 6228284-6228487 Caenorhabditis elegans
Exon91733   196   III: 6228635-6228830 Caenorhabditis elegans
Exon91736   88   III: 6229163-6229250 Caenorhabditis elegans
Exon91738   90   III: 6229313-6229402 Caenorhabditis elegans
Exon91740   101   III: 6230870-6230970 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.15.3 6224427 6230970 -1

1 Sequence

Length
2739

1 Sequence Ontology Term

Identifier Name Description
transcript