WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12A2.15.1 Sequence Name  T12A2.15.1
Length (nt)  2630   Chromosome Location  III: 6224436-6229403
Chromosome . Primary Identifier  III Chromosome Location . Start  6224436
Chromosome Location . End  6229403 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12A2.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020443 esyt-2 T12A2.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12A2.15 T12A2.15 2427   III: 6224618-6224695

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.15.1 6224436 6229403 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon91688   260   III: 6224436-6224695 Caenorhabditis elegans
Exon91689   109   III: 6224743-6224851 Caenorhabditis elegans
Exon91692   92   III: 6224975-6225066 Caenorhabditis elegans
Exon91695   136   III: 6225175-6225310 Caenorhabditis elegans
Exon91698   107   III: 6225357-6225463 Caenorhabditis elegans
Exon91701   128   III: 6225717-6225844 Caenorhabditis elegans
Exon91704   76   III: 6226180-6226255 Caenorhabditis elegans
Exon91707   81   III: 6226487-6226567 Caenorhabditis elegans
Exon91710   153   III: 6226842-6226994 Caenorhabditis elegans
Exon91713   159   III: 6227057-6227215 Caenorhabditis elegans
Exon91716   180   III: 6227263-6227442 Caenorhabditis elegans
Exon91719   303   III: 6227487-6227789 Caenorhabditis elegans
Exon91722   90   III: 6227929-6228018 Caenorhabditis elegans
Exon91725   177   III: 6228066-6228242 Caenorhabditis elegans
Exon91728   204   III: 6228284-6228487 Caenorhabditis elegans
Exon91731   196   III: 6228635-6228830 Caenorhabditis elegans
Exon91734   88   III: 6229163-6229250 Caenorhabditis elegans
Exon91739   91   III: 6229313-6229403 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12A2.15.1 6224436 6229403 -1

1 Sequence

Length
2630

1 Sequence Ontology Term

Identifier Name Description
transcript