WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47D12.1a Sequence Name  F47D12.1a
Length (nt)  1884   Chromosome Location  III: 6309421-6309576
Chromosome . Primary Identifier  III Chromosome Location . Start  6309421
Chromosome Location . End  6309576
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D12.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30134 GAR-2, isoform a 71.5 627 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00001530
WBRNAi00047644
WBRNAi00047645
WBRNAi00072210
WBRNAi00015184
WBRNAi00015185
WBRNAi00005619
WBRNAi00005913
WBRNAi00032435
WBRNAi00077394
WBRNAi00103366

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47D12.1a 6309421 6309576 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001518 gar-2 F47D12.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47D12.1a 6309421 6309576 1
CDS:F47D12.1a 6314196 6314350 1
CDS:F47D12.1a 6314399 6314483 1
CDS:F47D12.1a 6314705 6314926 1
CDS:F47D12.1a 6315304 6315419 1
CDS:F47D12.1a 6317712 6317882 1
CDS:F47D12.1a 6318141 6318305 1
CDS:F47D12.1a 6318387 6318678 1
CDS:F47D12.1a 6319038 6319109 1
CDS:F47D12.1a 6319331 6319456 1
CDS:F47D12.1a 6319568 6319606 1
CDS:F47D12.1a 6320319 6320603 1

1 Sequence

Length
1884

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47D12.1a.1 F47D12.1a.1 2180   III: 6309378-6320856