WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16A3.7 Sequence Name  C16A3.7
Length (nt)  3360   Chromosome Location  III: 6375391-6375604
Chromosome . Primary Identifier  III Chromosome Location . Start  6375391
Chromosome Location . End  6375604
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A3.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04007 NFX-1 125.1 1119 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040663
WBRNAi00008054
WBRNAi00010818
WBRNAi00005189

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16A3.7 6375391 6375604 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007048 nfx-1 C16A3.7 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16A3.7 6375391 6375604 1
CDS:C16A3.7 6375661 6376562 1
CDS:C16A3.7 6376613 6377144 1
CDS:C16A3.7 6377192 6378201 1
CDS:C16A3.7 6378252 6378602 1
CDS:C16A3.7 6378659 6379009 1

1 Sequence

Length
3360

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16A3.7.1 C16A3.7.1 3536   III: 6375379-6379173