WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09E7.7a.2 Sequence Name  C09E7.7a.2
Length (nt)  3130   Chromosome Location  III: 6546720-6551236
Chromosome . Primary Identifier  III Chromosome Location . Start  6546720
Chromosome Location . End  6551236 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015641 C09E7.7 C09E7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09E7.7a C09E7.7a 2988   III: 6546910-6547183

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.7a.2 6546720 6551236 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92636   117   III: 6546720-6546836 Caenorhabditis elegans
Exon92639   292   III: 6546892-6547183 Caenorhabditis elegans
Exon92642   213   III: 6547233-6547445 Caenorhabditis elegans
Exon92646   42   III: 6547490-6547531 Caenorhabditis elegans
Exon92650   102   III: 6547577-6547678 Caenorhabditis elegans
Exon92654   93   III: 6547726-6547818 Caenorhabditis elegans
Exon92658   63   III: 6547864-6547926 Caenorhabditis elegans
Exon92662   105   III: 6547970-6548074 Caenorhabditis elegans
Exon92666   415   III: 6548122-6548536 Caenorhabditis elegans
Exon92670   127   III: 6548580-6548706 Caenorhabditis elegans
Exon92674   309   III: 6548793-6549101 Caenorhabditis elegans
Exon92678   213   III: 6549149-6549361 Caenorhabditis elegans
Exon92682   204   III: 6549409-6549612 Caenorhabditis elegans
Exon92686   279   III: 6549867-6550145 Caenorhabditis elegans
Exon92690   150   III: 6550369-6550518 Caenorhabditis elegans
Exon92694   105   III: 6550565-6550669 Caenorhabditis elegans
Exon92698   210   III: 6550724-6550933 Caenorhabditis elegans
Exon92701   91   III: 6551146-6551236 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.7a.2 6546720 6551236 -1

1 Sequence

Length
3130

1 Sequence Ontology Term

Identifier Name Description
transcript