WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09E7.7a Sequence Name  C09E7.7a
Length (nt)  2988   Chromosome Location  III: 6546910-6547183
Chromosome . Primary Identifier  III Chromosome Location . Start  6546910
Chromosome Location . End  6547183
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25771 C09E7.7, isoform a 117.0 995 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00040194
WBRNAi00040195
WBRNAi00045714
WBRNAi00045715
WBRNAi00013986
WBRNAi00076353
WBRNAi00007092

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09E7.7a 6546910 6547183 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015641 C09E7.7 C09E7.7 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09E7.7a 6546910 6547183 -1
CDS:C09E7.7a 6547233 6547445 -1
CDS:C09E7.7a 6547490 6547531 -1
CDS:C09E7.7a 6547577 6547678 -1
CDS:C09E7.7a 6547726 6547818 -1
CDS:C09E7.7a 6547864 6547926 -1
CDS:C09E7.7a 6547970 6548074 -1
CDS:C09E7.7a 6548122 6548536 -1
CDS:C09E7.7a 6548580 6548706 -1
CDS:C09E7.7a 6548793 6549101 -1
CDS:C09E7.7a 6549149 6549361 -1
CDS:C09E7.7a 6549409 6549612 -1
CDS:C09E7.7a 6549867 6550145 -1
CDS:C09E7.7a 6550369 6550518 -1
CDS:C09E7.7a 6550565 6550669 -1
CDS:C09E7.7a 6550724 6550933 -1
CDS:C09E7.7a 6551146 6551229 -1

1 Sequence

Length
2988

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09E7.7a.2 C09E7.7a.2 3130   III: 6546720-6551236
Transcript:C09E7.7a.1 C09E7.7a.1 3190   III: 6546722-6551243