WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E12.1.1 Sequence Name  K07E12.1.1
Length (nt)  39690   Chromosome Location  III: 6746308-6794764
Chromosome . Primary Identifier  III Chromosome Location . Start  6746308
Chromosome Location . End  6794764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000998 dig-1 K07E12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E12.1 K07E12.1 39255   III: 6746478-6746552

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E12.1.1 6746308 6794764 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93393   99   III: 6746308-6746406 Caenorhabditis elegans
Exon93394   100   III: 6746453-6746552 Caenorhabditis elegans
Exon93395   100   III: 6747090-6747189 Caenorhabditis elegans
Exon93397   99   III: 6748760-6748858 Caenorhabditis elegans
Exon93398   53   III: 6749223-6749275 Caenorhabditis elegans
Exon93399   116   III: 6749366-6749481 Caenorhabditis elegans
Exon93400   347   III: 6749526-6749872 Caenorhabditis elegans
Exon93401   232   III: 6749921-6750152 Caenorhabditis elegans
Exon93402   576   III: 6750203-6750778 Caenorhabditis elegans
Exon93403   1040   III: 6750827-6751866 Caenorhabditis elegans
Exon93404   330   III: 6751914-6752243 Caenorhabditis elegans
Exon93405   101   III: 6752292-6752392 Caenorhabditis elegans
Exon93406   913   III: 6752439-6753351 Caenorhabditis elegans
Exon93407   171   III: 6753401-6753571 Caenorhabditis elegans
Exon93408   470   III: 6753622-6754091 Caenorhabditis elegans
Exon93409   1393   III: 6754145-6755537 Caenorhabditis elegans
Exon93410   2010   III: 6755581-6757590 Caenorhabditis elegans
Exon93411   197   III: 6757747-6757943 Caenorhabditis elegans
Exon93412   435   III: 6758464-6758898 Caenorhabditis elegans
Exon93413   2154   III: 6758950-6761103 Caenorhabditis elegans
Exon93414   852   III: 6761218-6762069 Caenorhabditis elegans
Exon93416   1125   III: 6762462-6763586 Caenorhabditis elegans
Exon93419   435   III: 6763828-6764262 Caenorhabditis elegans
Exon93420   1319   III: 6764351-6765669 Caenorhabditis elegans
Exon93421   137   III: 6765716-6765852 Caenorhabditis elegans
Exon93422   767   III: 6765907-6766673 Caenorhabditis elegans
Exon93423   1242   III: 6766739-6767980 Caenorhabditis elegans
Exon93424   1089   III: 6768082-6769170 Caenorhabditis elegans
Exon93425   199   III: 6769472-6769670 Caenorhabditis elegans
Exon93426   152   III: 6769719-6769870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E12.1.1 6746308 6794764 1

1 Sequence

Length
39690

1 Sequence Ontology Term

Identifier Name Description
transcript