WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07E12.1 Sequence Name  K07E12.1
Length (nt)  39255   Chromosome Location  III: 6746478-6746552
Chromosome . Primary Identifier  III Chromosome Location . Start  6746478
Chromosome Location . End  6746552
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E12.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54069 DIG-1 1371.7 13084 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00000746
WBRNAi00050164
WBRNAi00078923
WBRNAi00027406
WBRNAi00025908
WBRNAi00016727
WBRNAi00005183
WBRNAi00059931
WBRNAi00059932
WBRNAi00059934
WBRNAi00059936
WBRNAi00059937
WBRNAi00059933
WBRNAi00059935
WBRNAi00059938
WBRNAi00059939
WBRNAi00065740
WBRNAi00078269
WBRNAi00110313

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07E12.1 6746478 6746552 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000998 dig-1 K07E12.1 Caenorhabditis elegans

47 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07E12.1 6746478 6746552 1
CDS:K07E12.1 6747090 6747189 1
CDS:K07E12.1 6748760 6748858 1
CDS:K07E12.1 6749223 6749275 1
CDS:K07E12.1 6749366 6749481 1
CDS:K07E12.1 6749526 6749872 1
CDS:K07E12.1 6749921 6750152 1
CDS:K07E12.1 6750203 6750778 1
CDS:K07E12.1 6750827 6751866 1
CDS:K07E12.1 6751914 6752243 1
CDS:K07E12.1 6752292 6752392 1
CDS:K07E12.1 6752439 6753351 1
CDS:K07E12.1 6753401 6753571 1
CDS:K07E12.1 6753622 6754091 1
CDS:K07E12.1 6754145 6755537 1
CDS:K07E12.1 6755581 6757590 1
CDS:K07E12.1 6757747 6757943 1
CDS:K07E12.1 6758464 6758898 1
CDS:K07E12.1 6758950 6761103 1
CDS:K07E12.1 6761218 6762069 1
CDS:K07E12.1 6762462 6763586 1
CDS:K07E12.1 6763828 6764262 1
CDS:K07E12.1 6764351 6765669 1
CDS:K07E12.1 6765716 6765852 1
CDS:K07E12.1 6765907 6766673 1
CDS:K07E12.1 6766739 6767980 1
CDS:K07E12.1 6768082 6769170 1
CDS:K07E12.1 6769472 6769670 1
CDS:K07E12.1 6769719 6769870 1
CDS:K07E12.1 6770191 6770625 1

1 Sequence

Length
39255

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07E12.1.1 K07E12.1.1 39690   III: 6746308-6794764