WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13F6.6a Sequence Name  R13F6.6a
Length (nt)  1629   Chromosome Location  III: 6853300-6853419
Chromosome . Primary Identifier  III Chromosome Location . Start  6853300
Chromosome Location . End  6853419
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39026 ZAK-1, isoform a 62.3 542 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00000416
WBRNAi00051924
WBRNAi00051925
WBRNAi00051926
WBRNAi00017841
WBRNAi00017842
WBRNAi00005953
WBRNAi00005960
WBRNAi00075972
WBRNAi00103489
WBRNAi00097973

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R13F6.6a 6853300 6853419 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006971 zak-1 R13F6.6 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R13F6.6a 6853300 6853419 -1
CDS:R13F6.6a 6853468 6853674 -1
CDS:R13F6.6a 6853924 6854109 -1
CDS:R13F6.6a 6854157 6854285 -1
CDS:R13F6.6a 6854330 6854551 -1
CDS:R13F6.6a 6854611 6854837 -1
CDS:R13F6.6a 6854894 6855074 -1
CDS:R13F6.6a 6855163 6855240 -1
CDS:R13F6.6a 6855287 6855380 -1
CDS:R13F6.6a 6855625 6855809 -1

1 Sequence

Length
1629

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13F6.6a.1 R13F6.6a.1 2437   III: 6853106-6856809
Transcript:R13F6.6a.2 R13F6.6a.2 2451   III: 6853106-6856809