WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04C2.4.1 Sequence Name  K04C2.4.1
Length (nt)  2186   Chromosome Location  III: 6885207-6889504
Chromosome . Primary Identifier  III Chromosome Location . Start  6885207
Chromosome Location . End  6889504 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04C2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000265 brd-1 K04C2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04C2.4 K04C2.4 2109   III: 6885275-6885376

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04C2.4.1 6885207 6889504 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93723   170   III: 6885207-6885376 Caenorhabditis elegans
Exon93724   143   III: 6885456-6885598 Caenorhabditis elegans
Exon93725   61   III: 6885648-6885708 Caenorhabditis elegans
Exon93726   160   III: 6885758-6885917 Caenorhabditis elegans
Exon93727   116   III: 6886870-6886985 Caenorhabditis elegans
Exon93728   98   III: 6887028-6887125 Caenorhabditis elegans
Exon93729   201   III: 6887178-6887378 Caenorhabditis elegans
Exon93730   214   III: 6887421-6887634 Caenorhabditis elegans
Exon93733   309   III: 6887929-6888237 Caenorhabditis elegans
Exon93734   178   III: 6888291-6888468 Caenorhabditis elegans
Exon93735   60   III: 6888517-6888576 Caenorhabditis elegans
Exon93740   176   III: 6888894-6889069 Caenorhabditis elegans
Exon93741   169   III: 6889113-6889281 Caenorhabditis elegans
Exon93742   60   III: 6889331-6889390 Caenorhabditis elegans
Exon93743   71   III: 6889434-6889504 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04C2.4.1 6885207 6889504 -1

1 Sequence

Length
2186

1 Sequence Ontology Term

Identifier Name Description
transcript