WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K04C2.4 Sequence Name  K04C2.4
Length (nt)  2109   Chromosome Location  III: 6885275-6885376
Chromosome . Primary Identifier  III Chromosome Location . Start  6885275
Chromosome Location . End  6885376
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04C2.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44987 BRD-1 78.8 702 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00063726
WBRNAi00063730
WBRNAi00094767
WBRNAi00049891
WBRNAi00049892
WBRNAi00008064
WBRNAi00016586
WBRNAi00005980
WBRNAi00063720
WBRNAi00033941
WBRNAi00063724
WBRNAi00063728
WBRNAi00063718
WBRNAi00063722
WBRNAi00063732

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K04C2.4 6885275 6885376 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000265 brd-1 K04C2.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:K04C2.4 6885275 6885376 -1
CDS:K04C2.4 6885456 6885598 -1
CDS:K04C2.4 6885648 6885708 -1
CDS:K04C2.4 6885758 6885917 -1
CDS:K04C2.4 6886870 6886985 -1
CDS:K04C2.4 6887028 6887125 -1
CDS:K04C2.4 6887178 6887378 -1
CDS:K04C2.4 6887421 6887634 -1
CDS:K04C2.4 6887929 6888237 -1
CDS:K04C2.4 6888291 6888468 -1
CDS:K04C2.4 6888517 6888576 -1
CDS:K04C2.4 6888894 6889069 -1
CDS:K04C2.4 6889113 6889281 -1
CDS:K04C2.4 6889331 6889390 -1
CDS:K04C2.4 6889434 6889495 -1

1 Sequence

Length
2109

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K04C2.4.1 K04C2.4.1 2186   III: 6885207-6889504