WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.10b.1 Sequence Name  B0280.10b.1
Length (nt)  1238   Chromosome Location  III: 7131880-7133676
Chromosome . Primary Identifier  III Chromosome Location . Start  7131880
Chromosome Location . End  7133676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015105 pot-1 B0280.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.10b B0280.10b 462   III: 7131880-7132126

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.10b.1 7131880 7133676 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94388   247   III: 7131880-7132126 Caenorhabditis elegans
Exon94394   38   III: 7132217-7132254 Caenorhabditis elegans
Exon94399   93   III: 7132307-7132399 Caenorhabditis elegans
Exon94404   89   III: 7132449-7132537 Caenorhabditis elegans
Exon94409   149   III: 7132592-7132740 Caenorhabditis elegans
Exon94413   167   III: 7132862-7133028 Caenorhabditis elegans
Exon94418   81   III: 7133073-7133153 Caenorhabditis elegans
Exon94422   98   III: 7133211-7133308 Caenorhabditis elegans
Exon94427   148   III: 7133355-7133502 Caenorhabditis elegans
Exon94429   128   III: 7133549-7133676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.10b.1 7131880 7133676 -1

1 Sequence

Length
1238

1 Sequence Ontology Term

Identifier Name Description
transcript