WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0280.10b Sequence Name  B0280.10b
Length (nt)  462   Chromosome Location  III: 7131880-7132126
Chromosome . Primary Identifier  III Chromosome Location . Start  7131880
Chromosome Location . End  7132126
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.10b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52643 POT-1, isoform b 17.6 153 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00067964
WBRNAi00038834
WBRNAi00009649
WBRNAi00005435
WBRNAi00028048
WBRNAi00112178

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0280.10b 7131880 7132126 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015105 pot-1 B0280.10 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0280.10b 7131880 7132126 -1
CDS:B0280.10b 7132217 7132254 -1
CDS:B0280.10b 7132307 7132399 -1
CDS:B0280.10b 7132449 7132532 -1

1 Sequence

Length
462

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0280.10b.3 B0280.10b.3 642   III: 7131880-7132766
Transcript:B0280.10b.1 B0280.10b.1 1238   III: 7131880-7133676
Transcript:B0280.10b.2 B0280.10b.2 1132   III: 7131880-7133502